Software

  • SIRENE



    • SiReNe is a biological networks simulator that is based on a hybrid simulation scheme that combines time-stepping second-order integration of Hodgkin-Huxley (HH) type neurons with event-driven updating of the synaptic currents. As the HH model is a continuous model, there is no explicit spike events. Thus, in order to preserve the accuracy of the integration method, a spike detection algorithm is developed that accurately determines spike times. This approach allows us to regenerate the outgoing connections at each event, thereby avoiding the storage of the connectivity. Consequently, memory consumption is significantly reduced while preserving execution time and accuracy of the simulations.


    • SiReNe is a biological neural network simulator. The simulator engine can simulate any type of spiking neural network and is indeed more dedicated to the simulation of biologically detailed models of neurons, such as conductance-based neurons, and synapses.



    • Initial version of the software.


      • Nathalie Azevedo Carvalho, Sylvain Contassot-Vivier, Laure Buhry, Dominique Martinez. Simulation of Large Scale Neural Models With Event-Driven Connectivity Generation. Frontiers in Neuroinformatics, Frontiers, 2020, 14, pp.14. ⟨10.3389/fninf.2020.522000⟩. ⟨hal-03041616⟩


    • Sylvain Contassot-Vivier (sylvain.contassotvivier@loria.fr), Dominique Martinez (dominique.martinez@loria.fr), Nathalie Azevedo Carvalho (nathalie.azevedo-carvalho@loria.fr), Laure Buhry (laure.buhry@loria.fr)


    • Loria, CNRS, Université de Lorraine


    • Sylvain Contassot-Vivier (sylvain.contassotvivier@loria.fr)



    • https://sirene.gitlabpages.inria.fr/sirene/
  • OpenVIBE




    • OpenViBE is a free and open-source software platform devoted to the design, test and use of Brain-Computer Interfaces (BCI). The platform consists of a set of software modules that can be integrated easily and efficiently to design BCI applications. The key features of OpenViBE software are its modularity, its high performance, its portability, its multiple-user facilities and its connection with high-end/VR displays. The designer of the platform enables users to build complete scenarios based on existing software modules using a dedicated graphical language and a simple Graphical User Interface (GUI). This software is available on the Inria Forge under the terms of the AGPL licence, and it was officially released in June 2009. Since then, the OpenViBE software has already been downloaded more than 60000 times, and it is used by numerous laboratories, projects, or individuals worldwide. More information, downloads, tutorials, videos, documentations are available on the OpenViBE website.



    • Added:
      – Build: conda env for dependency management
      – Build: OSX support (Intel) except Advanced Visualization
      – Box: PulseRateCalculator
      – Box: Asymmetry Index Metabox
      – CI: gitlab-ci

      Updated:
      – Box: LDA Classifier scale independant
      – Box: Classifier trainer randomized k-fold option move from conf to box settings
      – Dependency: Boost version 1.71 -> 1.77
      – Dependency: Eigen version 3.3.7 -> 3.3.8
      – Dependency: Expat version 2.1.0 -> 2.5.0
      – Dependency: Xerces-C version 3.1.3 -> 3.2.4
      – Dependency: OGG version 1.2.1 -> 1.3.4
      – Dependency: Vorbis version 1.3.2 -> 1.3.7
      – Dependency: Lua version 5.1.4 -> 5.4.6

      Removed:
      – Build: CMake ExternalProjects dependencies (now in conda)
      – Build: Scripted dependency management
      – CI: Jenkins CI (now in gitlab)



    • Marie-Constance Corsi (marie-constance.corsi@inria.fr), Fabrizio De Vico Fallani (fabrizio.de-vico-fallani@inria.fr), Arthur Desbois (arthur.desbois@inria.fr), Sebastien Rimbert (sebastien.rimbert@inria.fr), Axel Bouneau (axel.bouneau@inria.fr), Laurent Garnier (laurent.garnier@irisa.fr), Tristan Cabel (tristan.cabel@inria.fr), Marc Mace (marc.mace@irisa.fr), Lea Pillette (lea.pillette@inria.fr), Anatole Lecuyer (anatole.lecuyer@inria.fr), Fabien Lotte (Fabien.Lotte@inria.fr), Laurent Bougrain (laurent.bougrain@inria.fr), Théodore Papadopoulo (theodore.papadopoulo@inria.fr), Thomas Prampart (thomas.prampart@inria.fr)


    • INSERM, GIPSA-Lab


    • Anatole Lecuyer (anatole.lecuyer@inria.fr)



    • http://openvibe.inria.fr

Comments are closed.